Matt Cieslak

Hi Apoorva, I can't tell from the static image if it's working or not. For your AP/PA data you will get distortion correction applied as long as the BIDS is...

This is probably fixed in 0.15.3, but I'd recommend waiting for the next major release as it looks like the 0.15 series introduced some problems

Hi @WilliamFCB, this is the most advanced eddy setup I've seen! Do you still see the striping artifact without adding the extra args?

These are calculated in DSI Studio - I don't believe there's a way to see which slices got flagged, but it would be worth asking Frank just to be sure

ah, very interesting! You are the first person I know of to try LSR with qsiprep. This may be a feature that gets added further down the road because I...

Hi Ariel, using `EstimatedTotalReadoutTime` should be fine. But of course please let me know if you find out differently. Is the value the same for both phase encoding directions?

Hi, thanks for reporting! This error is due to the images having slightly different affines, which could happen if the scanner operator moves the acquisition box a little between the...

Sorry for the delay @IRuotsa, there has been a recent release but this bugfix hasn't made it in yet.

@hfxcarl if your 8-direction image is all b=0's is it in the fmap/ or dwi/ directory? I think moving the 8-direction scan to fmap/sub-*_epi.nii.gz and add the dwi to the...

Hi @dyhan316 these errors can happen sometimes when the t1w image has a lot of motion in it. You can run freesurfer outside of qsiprep and still use the results...