Matt Cieslak

hmm this is pretty puzzling. Does the input dataset pass the bids validator?

@AlicjaMonaghan did you get this working?

Hi John! I wonder if we could use the reports mechanism to load the html directly into the visual report. There is a way to add a segment that is...

Hi William, Sorry for the late response! > In the anatomical stream it is stated that "OASIS was used as target template". > However, it is not clear what data/sample...

@WilliamFCB my main work right now is on infant data, so this is something we're thinking about a lot. Ultimately I think the T1w processing, skull stripping and spatial normalization...

Which directory are you using from the working directory? All the motion information is available in the `confounds.tsv` file, but it may need to be reformatted to match what eddyqc...

since qsiprep uses nipype, any files produced in the working directory that aren't used later in the pipeline get deleted. So it's possible that eddy writes a bunch of files...

Hi @giulia-berto, Starting at version 0.15 I removed most of the Freesurfer install because it took up a ton of space in the docker image and most users have been...

a couple things could be happening. If your data has only a single shell, 3dSHORE won't work as the hmc model. However, it's more likely that you're running out of...

@sidchop thanks for pointing this out! We're working on better supporting s2v and other GPU-based eddy features #181 and will add a fix for this in that PR