Masashi Tsubaki
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Masashi Tsubaki
CPI_prediction
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This is a code for compound-protein interaction (CPI) prediction based on a graph neural network (GNN) for compounds and a convolutional neural network (CNN) for proteins.
molecularGNN_3Dstructure
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Graph neural network (GNN) for molecular property prediction (3D structure)
molecularGNN_smiles
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The code of a graph neural network (GNN) for molecules, which is based on learning representations of r-radius subgraphs (i.e., fingerprints) in molecules.