Tyler Martin
## Summary When I have multiple images in a Jupyter notebook, I end up with the wrong image displayed in the final html file generated by sphinx/nbsphinx. I've created a...
# Summary When trying to read a 2D DataArray from a tiled catalog, a `ValueError` is raised because the length of the coordinate labels do not match the length of...
The first example in the tutorial/NB6.Cases.Studies.Nanocomposite notebook fails on _some_ users machines with the following error: > ValueError: Jacobian inversion yielded zero vector. This indicates a bug in the Jacobian...
PRISM is often used in the limit of dilution for particulate systems in order to calculate the potential of mean force. For a two component system in this limit, the...
There are two, somewhat separate ways that users might want to 'resize' their system: 1. The user want's to change the ``dr`` or ``length`` of their ``pyPRISM.Domain`` or to interpolate...
All of the examples in the tutorial should also be written to be unit tests. Since we already have the data extracted and pyPRISM scripts written (in the tutorial), this...
Many closures are expressed in terms of bridge functions. pyPRISM would benefit from having a system to easily handle closures in this form. I propose having a BridgeClosure class and...
Molecular closures are necessary for doing calculations of phase separating systems with thermal interactions. Without these closures, PRISM predicts the wrong critical temperature scaling with molecular weight. Having molecular closures...
It would be useful to save and load solved and unsolved PRISM problems from disk. Whether this would be best achieved by pickling the entire PRISM object or extracting the...