Martin Schorb

[BUG] dash.testing TypeError

7

Dear all, I tried to run the example test from https://dash.plotly.com/testing. When executing `pytest -k bsly001`, I run into: ``` _________________________________ ERROR at setup of test_bsly001_falsy_child _________________________________ @pytest.fixture def dash_thread_server()...

Make rotate available

5

This adds the rotate function to ndimage. I am struggling with the tests. https://github.com/dask/dask-image/issues/210

`ndimage` tests `test_affine_transform_general` and higher order parameters

4

Hi, I am working on a dask-image implementation of `ndimage.rotate`. The functionality is there and I am now trying to get the tests up and running similar to `affine_transform`. Now...

higher-level `ndimage`functionality

4

Hi, I am fighting with large image arrays and found @m-albert 's amazing contribution opening up `affine_transform`. https://github.com/dask/dask-image/pull/159 Would it be possible to make the higher-level functions (such as [`rotate`](https://docs.scipy.org/doc/scipy/reference/generated/scipy.ndimage.rotate.html)...

Dear all, I have a callback with a dynamic set of inputs. I thus use `ctx.inputs` or `ctx.inputs_list` to capture which elements are available. In the `dash-testing` documentation, it is...

support slicing stacks in arbitrary dimension

3

Hi, this should enable extracting only sub-dimensional parts of stacks. (-> single channels of multi-channel stacks for MoBIE etc...) I have not checked how it can be tested yet.

search bar errors

1

Hi, when typing in the search bar and no results are found, an error is thrown in the results page.  ``` java.lang.InternalError: Malformed class name at java.lang.Class.getSimpleName(Class.java:1330) at org.scijava.search.classes.ClassesSearcher.startsWith(ClassesSearcher.java:139)...

threadpool issue

11

Hi, I am trying to set up mboie_utils on Windows and Python 3.9 (fresh mamba installation, no other packages). I run into: ``` ...\cluster_tools\watershed\watershed.py", line 140, in @threadpool_limits.wrap(limits=1) # restrict...

Hi @constantinpape , I tried to implement what you suggested here https://github.com/constantinpape/cluster_tools/pull/42#issuecomment-1807688915 in mobie-utils-python` but found that `fit_to_roi` seems to be ignored by `copy_volume`. The resulting file still has full...

metadata - auto-fill scales from N5 attributes

1

auto-fill scales from N5 attributes