Martin Kim
Martin Kim
Just to add to my comment above, we do some validation checking that the saved var names match with the loaded mudata in `load`. In the case where an old...
sorry for the delay - I've merged support for this with #2769. thanks for putting in this initial pr! i'll close this now.
Hi @bio-la, sorry you're running into this issue. It looks like the issue might be slightly different than the Discourse threads you linked since the CI is running on Ubuntu,...
Oh, I think we have a typo in that code block. It should be: ``` scvi_model = scvi.model.SCVI(adata, **arches_params) ``` Thanks for bringing this up!
Hi, this is because scVI and scANVI expect the input to be raw counts. This is necessary because the generative portions of the models use distributions that only support non-negative...
New tutorial should ideally address https://github.com/YosefLab/velovi/issues/19, https://github.com/YosefLab/velovi/issues/15, and https://github.com/YosefLab/velovi/issues/18
Hi, I've generally had more success these days relying on pip for installing PyTorch and JAX. I think the following should work on a Windows machine (if you don't intend...
Hi, please try `from scvi.autotune import ModelTuner`
Hi, sorry forgot to mention, you can install all autotune dependencies with ```bash pip install -U "scvi-tools[autotune]" ``` For the error message, could you share the code you're running? Thanks
Closed due to inactivity