Martin Haagmans
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Martin Haagmans
My run command: ```uLTRA align /media/ssd1/martin/referentie/hg19.fa rna.sup.fastq ultra_out/ --ont --t 16 --index /media/ssd1/martin/referentie/ultra/``` I got the GTF from UCSC https://hgdownload.soe.ucsc.edu/goldenPath/hg19/bigZips/genes/ ``` chr1 refGene transcript 11869 14362 . + . gene_id...
```python vcfreader = vcf.Reader(open(vcffile, 'r')) for record in vcfreader: for call in record: print(call.data.AD) ```