Margaret Ho

Request for feedback on smudgeplot optimization and interpretation (diploid? haploid?)

6

Hi Kamil and folks, Thanks for creating this clever method to examine genome structure using k-mers and releasing the new beta version for us to test out. I'm hoping to...

Arange error, don't know how to solve

2

Hi @simoncchu I was able to run the Preprocess and Collect steps, but during assembly this is the error message that I get: ``` First round assembly and merger... **...

pipeline crashed : scaffold (key error)

2

Hi @schmeing I've tried troubleshooting with different conda installations and I can't get Gapless to run on my assembly. The command that fails and yields `pipeline crashed : scaffold` is...