Dr Marco Claudio De La Pierre
Dr Marco Claudio De La Pierre
That looks really promising, wow! One thing to think about is assumptions/choices to handle binary list vs available versions... - overrides for each version may be an overshoot - oldest...
After 5+ years of teaching coding at a supercomputing centre, and using Git for my own work, I have just taken part in the Carpentries Instructor training, and used the...
Hi @kmotoko , could you provide additional information on the way your pipelines make use of S3 storage?
I would suggest exposing this option as a generic executor one, `executor.account`, rather than creating the new `slurm` config scope. Indeed, other executors implement it, e.g. PBS has `-P `.
minor note: we will need to document the new option in the Wave page inside the Nextflow docs.
adding to conversation, I would like to review together the current proposal vs conversations from last week: https://github.com/nextflow-io/nextflow/issues/4670#issuecomment-1965251321 https://github.com/nextflow-io/nextflow/issues/4670#issuecomment-1965377052 In particular, see this example: ``` // main.nf output { genome...
> Index file generation and shortcut for multi-channel would both be worth exploring in a second iteration in my opinion I would consider prioritising multi-channel shortcut sooner rather than later,...
On redirecting publish targets from within the `publish:` section: Would this only be allowed at the workflow level, not process level? If so, maybe it wouldn't be as error prone....
From the chat Paolo and I had on Monday, I would say one key aspect of point 1 on `meta.yml` is the module-level character of some key information: list of...
A comment on Paolo's concept above. Do we need to use the `topic`? or could we instead name a list of those `processes`, that are part of the workflow and...