Dr Marco Claudio De La Pierre

One last point on the `picocli` error messages. For instance, this fails because the executables needed by some tasks are not available: ``` launch-v2.sh run marcodelapierre/toy-cowsay-nf -r main ``` At...

I am done with my testing, so Ben once you address the points above, I will be happy with merging

I was attempting the test case described above. However I am getting an unrelated error, both with stable Nextflow and this build: ``` Unexpected path for Fusion script launcher: /Users/marco.delapierre/test/fusion-fix/work/45/681d22ba7f16b2567dc00f7a356900...

Just confirming I have the above issue when testing Fusion, with any of stable, edge, build from this PR. Both on x86 and ARM, also tried with a different container....

Here are my first thinkings: - The syntax should explicitly reference its usage of `conda`, as there are other ways of installing Pip packages, in particular `pip` itself and newer...

Thanks for the extra details Ben, by defining workDir and amazon credentials properly I could run the tests. I confirm your finding with Nextflow 23.10.1 stable and any of the...

I would like to call for some extra comments around 1. and 5., considering the +1s they received. 1. package-level prefix ``` conda 'pip:numpy pip:pandas samtools' ``` 5. extra attribute...

Thanks for the extra thoughts folks. 1. I do think it is worth adding the sugar syntax, the effort is small. 2. I did want to get extra feedback on...

@pditommaso as we were talking about supporting the functionality in Wave CLI. From `wave --help`: ``` --conda-package='' One or more Conda packages used to build the container e.g. bioconda::samtools=1.17 ```...

After quick chat on this with Paolo, and also quick testing, we should NOT go ahead with this in-line syntax sugar: - some specific implementations introduce artificial syntaxes that may...