Mash
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Fast genome and metagenome distance estimation using MinHash
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Mash issues
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``` g++ -c -O3 -std=c++14 -Isrc -I/vol/mgx-sw/src/tools/Mash/../capnproto-c++-0.10.2/include -I/vol/mgx-sw/include -include src/mash/memcpyLink.h -Wl,--wrap=memcpy -o src/mash/CommandTaxScreen.o src/mash/CommandTaxScreen.cpp In file included from src/mash/CommandTaxScreen.cpp:11: src/mash/taxdb.hpp: In member function ‘void mash::TaxDB::writeReport(FILE*, const std::unordered_map&, long unsigned int,...
As I understand, the "match" output of mash distance is the number of matching hashes among all hashes. Number of all hashes is defined by sketch size. Right? I call...