pnet_prostate_paper
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marakeby
P-NET, Biologically informed deep neural network for prostate cancer classification and discovery
File configuration error """ dependencies: ... h5py=2.9.0l.c ... """ should be modify. I try to change it: """ dependencies: ... h5py ... """ the code is working. However, I am...
My conda base is python=3.9. I create env in this base. However, I am not sure whether it will affect the subsequent analysis. We look forward to your reply !!...
Any suggestion or comments with reference to PNET architecture will be helpful.
Problem 1, the lifelines in environment.yml need to install the dependency package Bottleneck, pip will install Bottleneck1.3.4 by default, but there are problems causing Bottleneck1.3.4 will always fail to install,...
Dear @marakeby, Thanks for developing and releasing PNET. I am trying to do exploratory analyses in some multimodal data using this framework. Labels are more than two, so I wonder...
During installation I found a conflict with the `decorator` package version that is installed. Namely, the default version conda installs gets into conflict because it gets in conflict with `...
I am trying on windows conda env create --name pnet_env --file=environment.yml and getting this error Using Anaconda Cloud api site https://api.anaconda.org Fetching package metadata: .... Error: No packages found in...
Hi, Can someone please tell me how to rectify the environment error. I am encountering this error for a few days now and the code does not run. My base...
I got an issue, where I can find the file "P1000_final_analysis_set_cross__no_silent_no_introns_not_from_the_paper.csv"? It's mentioned in "data_reader.py", please let me know if you get it, thank you!
