David Manthey

Results 148 comments of David Manthey

We'd welcome improvements, either in the code or the docs. I know that some others have run GPU code (for instance https://github.com/SarderLab/Histo-cloud), though I don't know the specifics of what...

I'll have to think about how to do this generally. Currently, there is only the support to pass through a girderApiUrl and girderToken. I think passing through local ENV is...

The girderApiUrl and girderToken fields are auto-populated if left blank. You should be able to use them inside the cli like so (here there is another string input of `itemId`):...

There needs to be a convenient way to pass a Girder ID for an item, file, or other resource and/or a convenient way to pass a specific annotation or set...

I think you are right that some of the access needs to be changed to @access.token. Have you had to modify any access points in the core of Girder? Or...

There is a work-in-progress of this on the https://github.com/DigitalSlideArchive/digital_slide_archive/tree/docker-compose branch.

The docker-compose script can handle everything that the deploy_docker.py script can do. If there is still substantial value in a command-line starting script, it would probably be better to emit...

@BryonLewis Does CI pass if you merge #3422?

> > @BryonLewis Does CI pass if you merge #3422? > > It appears that it does pass. Great. I'll merge #3422.

I think the main difficulty here is going to be generalizing the installation of cuCIM. For all of our other tile sources, we build a python wheel to facilitate the...