malonzm1

Hi, I have about 700+ fastq files (16 GSE IDs) I would like to submit to get gene expression files. Is there a way for me to programmatically do this...

Hi, Does cellsnp-lite allow matching of SNPs to cell barcode? Good day.

celltypist before/after batch correction

10

Hi, I perform batch correction using scVI. But I perform celltypist prediction before batch correction. Is it better to perform celltypist after batch correction or it doesn't matter? Good day.

UMAP of gene subset of adata

3

### Please make sure these conditions are met - [X] I have checked that this issue has not already been reported. - [X] I have confirmed this bug exists on...

Error running cibersort

1

Hi, When I try to run cibersort, I run into the following error: > res