alex.hohn

R Session Aborted R encountered a fatal error The session was terminated

4

Hi Chi When I updated 'microeco' to V 1.6.0, I used the following code to plot the microbial network: t1

itol.toolkit--Color_Palette function

1

Hello, I tried to assign a color to the tree. When I used the following code, I kept getting prompted: Error: Object 'Phylum_color' not found. I compared the sample file...

snippy-multi ERROR: Can't open --ref BZ100/ref.fa

8

Hi, I have a question for you about snippy-multi: I tried to run snippy-multi. I first generated a label file (input.tab) as follows: BZ93 /home/disk/project/G20240703/genome_analysis/geome/BZ93.fsa BZ_48_8 /home/disk/project/G20240703/genome_analysis/geome/BZ_48_8.fsa BZ107 /home/disk/project/G20240703/genome_analysis/geome/BZ107.fsa BZ85...

How do CCA calculations use the first 10 Phylum/Genus?

3

Hi I am using CCA analysis to calculate the relationship between the environmental factors and the top 10 Phylum/Genus, but I found that the RDA analysis can select the top...

How to read three genome file formats together

4

hi I want to use pgcgap to construct a whole genome phylogenetic tree of 120 strains. I used pgcgap to read in the genome file, but it seems that pgcgap...

tbl_vars" has no method applicable to the "c('double', 'numeric')

2

**Describe the bug** When I followed the tutorial ‘’https://tongzhou2017.github.io/itol.toolkit-gallery/Zheng2022Fig3ALeft/’’ to draw an evolutionary tree, I encountered a function error. Error content: Error in UseMethod("tbl_vars") : "tbl_vars" has no method applicable...