Patch-GCN

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c-index value on validation set is very high

2

In the BRCA dataset, the c-index of the training set is around 0.67, while the c-index of the validation set reaches 0.82+. Is this normal?

genhao3

Hello, when I've successfully reproduced the c-indices in BRCA, UCEC and BLCA. However, when it came to LUAD, I got 0.529072 ± 0.057346, which is much lower than 0.585 ±...

wangbo00129

Hello, thanks for your great work. I'm trying to reproduce your results in your article. I succeeded in BRCA. However, when I tried to reproduce in GBMLGG, it failed to...

wangbo00129

Where do you change the learning rate? I don't see one scheduler to decrease the learning rate.

ljhOfGithub

The error message you provided indicates that the code is unable to find the file 'tcga_blca_20x_features\graph_files\tcga_blca_20x_features\graph_euclidean_files\TCGA-XF-AAMW-01Z-00-DX1.875DED6D-805B-418C-8C9E-AE45FDECC504.pt'.

superli6

Hi @Richarizardd, Thanks for sharing the code. I have a question regarding graph construction in latent space: I was wondering why do you pass coords to the query function for...

pazadimo