Fahri Küçükali

Recalculating Rsq Imputation Quality Values

6

Hi, First of all, thanks a lot for developing Minimac4, it is a great tool. I have an issue regarding recalculating (and replicating) Rsq (imputation quality) values. I am interested...

Converting Beagle imputed VCF for TRTools

5

Hi First of all, thanks for developing TRTools! I have a question regarding imputed STR input files. I have a Beagle (v5.4) imputed VCF file that looks like below: >##fileformat=VCFv4.2...

Question about sdY

1

Hi, First of all, thanks a lot @chr1swallace again for developing coloc - it has been very useful for us to answer many questions we have. A big thanks! I...

Inconsistent Filtering of CIGAR Strings by filter_cs.py

10

Hi, first of all thank you for developing/maintaining Leafcutter which is among my favourite tools definitely! I have come across with an issue while looking at reads for one sample...