Deyan Donchev

HI, I keep having a similar issue. I don't receive the Warning: Expected read coverage is 1017 as Paul. It seems that the assembly:flye step is expecting assembly.fasta as an...

@vmurigneu yes I can check the content them. They seem to appear hidden and I cannot upload them directly, so I copied the content into a txt file [error.txt](https://github.com/BeatsonLab-MicrobialGenomics/micropipe/files/9265568/error.txt) .

I assumed that I had problems with permission however I changed the permission to the output folder to drwxrwxrwx, but this wasn't the case, because it was able to write...