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nuclear compartments, subcompartments, nuclear organization, Hi-C, autoencoder

Results 11 SNIPER issues
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Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 1.12.2 to 2.11.1. Release notes Sourced from tensorflow's releases. TensorFlow 2.11.1 Release 2.11.1 Note: TensorFlow 2.10 was the last TensorFlow release that supported GPU on native-Windows. Starting...

dependencies

Bumps [tensorflow-gpu](https://github.com/tensorflow/tensorflow) from 1.12.0 to 2.12.0. Release notes Sourced from tensorflow-gpu's releases. TensorFlow 2.12.0 Release 2.12.0 TensorFlow Breaking Changes Build, Compilation and Packaging Removed redundant packages tensorflow-gpu and tf-nightly-gpu. These...

dependencies

Bumps [werkzeug](https://github.com/pallets/werkzeug) from 0.14.1 to 2.2.3. Release notes Sourced from werkzeug's releases. 2.2.3 This is a fix release for the 2.2.x release branch. Changes: https://werkzeug.palletsprojects.com/en/2.2.x/changes/#version-2-2-3 Milestone: https://github.com/pallets/werkzeug/milestone/26?closed=1 This release contains...

dependencies

Bumps [protobuf](https://github.com/protocolbuffers/protobuf) from 3.6.1 to 3.18.3. Release notes Sourced from protobuf's releases. Protocol Buffers v3.18.3 C++ Reduce memory consumption of MessageSet parsing This release addresses a Security Advisory for C++...

dependencies

Bumps [numpy](https://github.com/numpy/numpy) from 1.15.4 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependencies

Hi thanks for the tool. for the pre-computed models, are they in hg19 or hg38? does it matter? could i just use the hg19 modelsl to predict an input hic...

Hi Thanks to develop so wonderful tool, but I had some problems when I apply SNIPER models to my hic data. When I have downloaded pre-computed SNIPER models, I found...

Bumps [pyyaml](https://github.com/yaml/pyyaml) from 4.2b2 to 5.4. Changelog Sourced from pyyaml's changelog. 5.4 (2021-01-19) yaml/pyyaml#407 -- Build modernization, remove distutils, fix metadata, build wheels, CI to GHA yaml/pyyaml#472 -- Fix for...

dependencies

Thank you for making available this software. It appears that the provided crop map files are for hg19. Since hg38 results are given in the paper, is it possible to...