Muhammad Waqas Khokhar

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Results 1 issues of Muhammad Waqas Khokhar

Stringtie skips pseudo genes from reference gtf

I have mapped data using STAR and know trying to generate assembly using stringtie, the reference annotation gtf file contains [38464 genes and 47387 transcripts](https://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_alecto/all_assembly_versions/GCF_000325575.1_ASM32557v1/GCF_000325575.1_ASM32557v1_genomic.gtf.gz). When I tried to assemble...