luisafmc

File mouse_ref_mapping.txt

1

Hi, I'm just trying to mapping my RNA reads to mouse genome of reference: I just want to know where can I found the mouse_ref_mapping.txt or how was there structure...

Hi, I'm trying to build an index with the annotation file and fasta file of the most recent from of mouse reference genome. I've donwloaded from NCBI ftg (https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39/GCF_000001635.27_GRCm39_genomic.fna.gz and...

This script is really helpful, thank you. I just wondering if it is possible to obtain the intermediate files for ani.rb. Thank you