lthomp06

Nanopolish with biological replicates

6

Hello, I am looking to identify differences in methylation between two isogenic replicates. I have oxford nanopore sequencing of three biological replicates for two strains, and am looking to compare...

Level sample compare not accessing index file

1

Hello, I am trying to compare methylation between two samples using the Tombo level_sample_compare command. When I run this command I get the following output: tombo resquiggle ~/Desktop/Tombo/Ont-Fast5-Api_tombo/single_reads_EK09-1/ CP009273.fasta --processes...