lshep

@ococrook will you be doing a re-review here?

I'm getting the following ERROR when running R CMD check ? ``` * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'vmrseq-Ex.R' failed The...

Could you also please remove the doc directory. These files should be generated interactively when the package is built.

@nshen7 may we expected updates soon that address the review comments?

@nshen7 did you push to git.bicoonductor.org as there is no trigger for the new build report?

I currently cannot build the package ``` R CMD build crupR * checking for file 'crupR/DESCRIPTION' ... OK * preparing 'crupR': * checking DESCRIPTION meta-information ... OK * installing the...

``` R CMD build crupR * checking for file 'crupR/DESCRIPTION' ... OK * preparing 'crupR': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating...

You currently write a file, INPUT_VCF_FILE.vcf, to a users home directory by default. Please use tempdir() instead.

@huangyizR will you be responding to the review?

You have an incomplete DESCRIPTION. Please fill out description. We prefer to have a clean upload to Bioconductor. Please remove pkgdown and dev directories from default branch until uploaded to...