Lenore Pipes

icon indicating a website link https://pipes-lab.pbrc.hawaii.edu/ icon indicating an email [email protected]

icon company University of Hawai'i at Mānoa icon location Honolulu, HI icon location Assistant Professor

Results 4 comments of Lenore Pipes
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Manual requires login

I can't access the manual

masked alignment different from global tree in GISAID

Hi Rob, Thanks for your explanation. The tree I recently downloaded (dated 2021-09-26) only had ~600K sequences in it. But I just downloaded the most recent tree (dated 2021-10-05) which...

masked alignment different from global tree in GISAID

Hmm seems like that doesn't work either ugh... `xz -d mmsa_2021-10-06.tar.xz` `xz: mmsa_2021-10-06.tar.xz: Unexpected end of input`

masked alignment different from global tree in GISAID

In fact, I've tried to extract every single MSA file that they have posted and all of them have an `Unexpected EOF in archive`. I sent them a message though.