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Published 20 hours ago • verified publisher icon lmrodriguezr
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Estimate metagenomic coverage and sequence diversity

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Nonpareil does not finish with small file

Running `nonpareil` as: ``` nonpareil -t 2 -R 7168 -T kmer -s HD827sonic_1_lib1_collapsed.fastq.gz -f fastq -F -o HD827sonic_1_lib1_collapsed.npo -a HD827sonic_1_lib1_collapsed.npa -C HD827sonic_1_lib1_collapsed.npc -l HD827sonic_1_lib1_collapsed.log ``` with the file [HD827sonic_1_lib1_collapsed.fastq.gz](https://github.com/user-attachments/files/17294297/HD827sonic_1_lib1_collapsed.fastq.gz) does...

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Estimate metagenomic coverage and sequence diversity

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