PepNet
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lkytal
The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra
Hi, i was trying to follow the tutorial, but i couldn't find the python script "evaluation.py" `python evaluation.py --mgf example.mgf --novorst example_prediction.tsv` Can you tell me where i can download...
Hi, Our dataset have lots of modifications which are important, is it possible to modify the model a bit, such that we can train PepNet from scratch by ourselves to...
Hi, I came across a paper related to PepNet. I want to integrate it in my de novo sequencing pipeline, but I am wondering if it is possible to get...
I'm currently considering including PepNet in [Galaxy](https://galaxyproject.org/), i.e. to add a Galaxy tool. For this, a conda package for Pepnet would be required. I could work on both (actually I...
After running the following command: `python denovo.py --input example.mgf --model model.h5 --output example_prediction.tsv` I get this error lib/python3.7/site-packages/keras/engine/input_spec.py", line 200, in assert_input_compatibility raise ValueError(f'Layer "{layer_name}" expects {len(input_spec)} input(s),' V**alueError: Layer...
