Yang Liu

> Suggestion by lukaszkruk worked for me! I just saved the plot first and then used ggsave() Can you provide a sample for save PDF? When I save first time...

Please update number.angles=90 features, for large numbers in the plotting. Thanks! 

Hi @tensulin , glad you are interested in nanome pipeline. I welcome you create the PR to solve the `clusterOptions` issue, and I will test and merge it. Thank you!

Dear author, I have applied the token for my account: [email protected] one week before. But I haven't got your reply. Would you please help me to get my token? Thank...

Hi, I faced the same issue when install scimap, below is error message: ``` Collecting pyqt6=6.6.1 (from scimap) Using cached PyQt6-6.6.1.tar.gz (1.0 MB) Installing build dependencies ... done Getting requirements...

Hi, I am using Linux OS. I am using exactly you provided new conda environment, as below: ``` conda create --name scimap python=3.10 conda activate scimap pip install scimap ```

I used python 3.9 as you provided above, but still same error when install pyqt6.

Docker test has been passed, we will add singularity test after we push singularity image into a public portal.

Achieved by https://github.com/TheJacksonLaboratory/nanome/pull/108. Results can be found here: https://github.com/TheJacksonLaboratory/nanome/actions/runs/1283587877.

This error is very strange, since the input file link is already located at the Github. Would you please rerun to see if it is reproducible, and post the Nextflow...