liscruk

icon company University Hospital Erlangen, AG Bruns icon location Erlangen icon location A bioinformatician who likes sequencing stuff.

Results 2 issues of liscruk

Supply bam or use single end reads?

2 comment

Hello, I am trying to run Clinker on JAFFAL output generated from Nanopore long-reads. Hence I do not want or have paired-end reads as input for STAR alignment. Is there...

modkit dmr pair fails with thread '<unnamed>' panicked at modkit-core/src/parsing_utils.rs:34:75:

3 comment

Hi, I am running modkit dmr pair on two shallow sequencing runs, and for a while, everything runs without a problem. However, at somepoint after processing millions of sites without...

troubleshooting