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Published 20 hours ago • verified publisher icon lh3

minimap 2.24-r1122 Segmentation fault

Open twang15 opened this issue 1 year ago • 0 comments

Steps to reproduce:

  1. input sample: sample.fa.gz

  2. reference genome: wget https://hgdownload.cse.ucsc.edu/goldenpath/hg38/bigZips/hg38.fa.gz gzip -d hg38.fa.gz

  3. download minimap2: curl -L https://github.com/lh3/minimap2/releases/download/v2.24/minimap2-2.24_x64-linux.tar.bz2 | tar -jxvf -

  4. Run ./minimap2-2.24_x64-linux/minimap2 -t 1 -ax splice --secondary=no ./hg38.fa ./sample.fa.gz

twang15 avatar Jul 06 '22 16:07 twang15