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Does minimap2 consider base qualities?

Open ezherman opened this issue 1 year ago • 0 comments

I understand from this 2019 issue (#353) that minimap2 ignores base qualities. However the man page lists the -Q option: "Ignore base quality in the input file." Does minimap2 consider base qualities these days? And what is the effect of the -Q option?

Thanks!

ezherman avatar Jul 26 '24 10:07 ezherman