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                                            lequyanh

when I use GPU to accelarate colabfold_search , it slower than colabfold_search by using cpu

My guess is that you specify `db-load-mode` to be 0, whereas indexes are called with 2. The search script will actually set the parameter to the optimal value by default

when I use GPU to accelarate colabfold_search , it slower than colabfold_search by using cpu

In my experience it depends on how much RAM you have. Around 128GB I was able to search a query under a minute. With 64GB 12 minutes (same GPU)