leeyb9916

how to calculate the #nodes of pangenome info page of the report

1

In the Pangenome Info page of the html report, on the groups tab, the number of nodes per sample appears to be greater than the total node count in the...

Issue with unplaced contig naming in reference genome for array-analysis-cli (--gtc-to-vcf)

1

I'm working with the array-analysis-cli v1.0.1 (https://support.illumina.com/array/array_software/ima-array-analysis-cli.html) tool to convert Illumina GTC files to VCF. (using `array-analysis-cli genotype gtc-to-vcf`) According to the documentation, the contig naming format must match between...