leehous

or sometimes it is "terminate called after throwing an instance of 'boost::exception_detail::clone_impl' what(): failed opening file: The system cannot find the file specified.​ : iostream error FATA[13:28:03] Cannot execute program....

@prvst @fcyu @guoci Hello?

Dear anesvi， I'm sorry，I forget the time，I will wait in patience，thank you for responce ---- 回复的原邮件 ---- | 发件人 | Alexey ***@***.***> | | 日期 | 2022年04月05日 13:56 | |...

While, the version i use is exactly older, while I noticed that the error not happens every time. Do you mean that this is the source code, which is not...

Dear professor anesvi, I have updated the Fragpipe and philosopher version as your advice, while the error still appears, do you have any suggestions about parameters? The error I meet...

Here is the log files ,thanks very much professor anesvi! [log_2022-04-05_15-14-43.txt](https://github.com/Nesvilab/FragPipe/files/8415949/log_2022-04-05_15-14-43.txt)

Thank you for your sugggestions, professor anesvi. In fact，I just modified limited parameters, such as LOS, missed cleveages, precursor lower limits ,checked crystal-C and PTM-shepred, do you mean that these...

I think I figured out the reason. When I analysis a raw file names with "_c", the crystal-C validation couldn't output corresponding pepxml files suffixed with "_c", then no input...