Tyrone Lee

widget fails to load "vitessce-jupyter.js:1 Failed to load resource: the server responded with a status of 404 (Not Found)"

2

**Describe the bug** This was noticed on [RStudioConnect ](https://ccb-rstudio-connect.hms.harvard.edu/Vitessce_hypothalamus_python/) which converts all juypter content into html via Nbconvert. The resulting html page does not load vitessce widgets. More details from...

widget fails to load "vitessce-jupyter.js:1 Failed to load resource: the server responded with a status of 404 (Not Found)"

5

**Describe the bug** This was noticed on [RStudioConnect ](https://ccb-rstudio-connect.hms.harvard.edu/Vitessce_hypothalamus_python/) which converts all juypter content into html via Nbconvert. The resulting html page does not load vitessce widgets. More details from...

Nbconvert output of html/javascript in output does not render in 6.5 (works still in 6.4) #1844

2

**Describe the bug** So this was noticed on [RStudioConnect ](https://ccb-rstudio-connect.hms.harvard.edu/Vitessce_hypothalamus_python/) on O2. For some reason only vitessce seems affected but html widgets do not render after conversion with nbconvert (which...

[R] cannot load 'httpfs' ; package cannot find extension file despite being provided correct path.

9

### What happens? Installing duckdb extension `httpfs` is successful, loading the extension despite that fails. Path does not contain any special characters and has full read/write permissions. Furthermore, other extensions...

.addSpecificTour cannot be used to edit panel specific UI tours. Global tour cache is cleared upon iSEE() function call.

1

I might reveal a severe lack of knowledge about R development but here's my issue. I've been trying to modify the rintrojs tour of a ColumnDataPlot in my app. I...

obsSets on multiple datasets running out of colors to label

1

**Describe the bug** Something odd with multiple datasets. In this vitessce config there are multiple datasets with the same `obs` labels `"obs/Cluster_Tier1_long"` and `"obs/Cluster_Tier2_long"` in theory they should have the...

I got the spatial plot working on an Anndata ->Anndata.zarr dataset but for some reason the resulting plot is flipped on the Y-Axis. A number of things could have gone...

### Guidelines - [X] I agree to follow this project's Contributing Guidelines. ### Description A method or perhaps suggest best practices for embedding a `shiny.gosling` plot into a Rmd vignette...

Methods for overlaying or superimposing structures.

1

Not sure why #14 was closed, I dont see an answer nor do I see any newer features on multiple structures in the same view. So I'm suggesting a similar...