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                                            lawson-a-m

Troubleshooting ruby script for using --min-identity when plotting

[combo-x_test.json.gz](https://github.com/delehef/asgart/files/15253104/combo-x_test.json.gz) Here is the json file, which had asgart-extract ran to insert the sequence! The fasta it was generated from is bigger than 25MB even when gzipped so github won't...

Troubleshooting ruby script for using --min-identity when plotting

Ah, I see! I have MAFFT loaded as a module and is version 7.310 if that is potentially contributing. Here is the output when I remove ">2/dev/null" from line 32:...

Troubleshooting ruby script for using --min-identity when plotting

Hi @delehef Sorry for the really late reply! Even after fixing the missing parenthesis I still was having issues, but it was determined that it was due to something with...