Lauren Mak

Understood! Thanks for the explanation. Could you provide an example of setting the `profile` parameter using `snakemake.main(["arg1", "arg2", etc...])`? I went through `__init__.py` to see how `main()` is implemented but...

I also have this problem! Error correction runs perfectly with 11/12 samples but for some reason, it hangs on the one specific sample, namely R2 of the sample's paired gzipped...

I got the same error as well. Is there an ETA on the fix?