Laura Martens

icon indicating a website link https://lauradmartens.github.io/ icon indicating an email [email protected]

icon company Helmholtz Munich/ Technical University Munich icon location Munich icon location Graduate student at TU Munich and Helmholtz Zentrum Munich.

Results 4 comments of Laura Martens

Change order of chromosomes

Thanks a lot! I agree, it saved a lot of time ;)

MultiVI with Poisson/NB likelihood for ATAC?

Yes, I also think it should be relatively straightforward and also remember that @marianogabitto already had an implementation

Read bam with split reads

That's a good point! I guess I thought of it rather in the context of RNA coverage rather than ATAC because it would be nice to also use your storage...

Poissonmultivi

I added the option to have separate size factors for RNA and ATAC, not sure if this is the best way.