laurabaxter21

codan fails and kills pipeline due to finding duplicate key(s)

4

Running the latest run_finder-v1.1.0. Everything runs fine until the codan step (Braker is complete), which finds a duplicate key and kills the pipeline. Looking at the assemblies_psiclass_modified/combined/combined_split_transcripts_with_bad_SJ_redundancy_removed.fasta file for duplicated...