chipseq_pipeline icon indicating copy to clipboard operation
chipseq_pipeline copied to clipboard

Published 20 hours ago • verified publisher icon kundajelab

Trimmed data-sets

Open pixelRaquel opened this issue 6 years ago • 1 comments

Hello,

Is it correct to run the pipeline after trimming adaptors in paired-end data-sets? I get different read lengths.

Raquel

pixelRaquel avatar Apr 10 '18 20:04 pixelRaquel

Yes, chipseq pipeline does not have any adapter-trimming step.

Jin

leepc12 avatar Apr 26 '18 23:04 leepc12