genome hg38 install

[danxunLi]

Hello!

I am using the atac-seq-pipeline and getting this error message when trying to install the hg38 genome; has it been moved?

$ bash conda/install_genome_data.sh hg38 genome-local-38/

--2019-03-14 18:40:53-- http://mitra.stanford.edu/kundaje/genome_data/hg38/hg38.blacklist.bed.gz Resolving mitra.stanford.edu (mitra.stanford.edu)... 171.67.96.243 Connecting to mitra.stanford.edu (mitra.stanford.edu)|171.67.96.243|:80... connected. HTTP request sent, awaiting response... 404 Not Found 2019-03-14 18:40:53 ERROR 404: Not Found.

[yinshiyi]

i think so, failed for me too

[leepc12]

The latest atac-seq-pipeline does not have conda/install_genome_data.sh. Are you guys using an old version? The latest one has conda/build_genome_data.sh

[yinshiyi]

thanks