kunalkathuria

failed to read alignments from BAM

2

Hi, I got the following error while trying to run snaptools after following all previous steps ending with name-sorting the snap.bam: (This was after the first try where the BAM...

NVariants simulated issue and DUP:ISP/TRA?

11

Hi, I have a couple of questions. 1) When I simulate variants I usually do not get the required number. e.g. --sv_num_del 5000 --sv_num_inv 5000 yields ~3500 deletions and ~700...