ktyssowski

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just found a relevant thread on this here: https://forum.image.sc/t/cellpose-on-macos-m1-pro-apple-silicon-arm64/68018/30 starting yesterday (2/12/23)

Did you ever figure out the question of where exactly softmax must be specified? I tried switching to softmax, but am still getting a lot of places where multiple behaviors...

> > @hermancollin , @ktyssowski inquired by email if this tool had been integrated into the main software yet. I don’t think it has, is it because it may be...

this is not out yet, correct? i just wanted to make sure i'm not missing it! if not - no worries -- i will just continue to troubleshoot the other...

Great! Thank you! here is a mask: ![sub-7790_sample-031_TEM](https://github.com/axondeepseg/axondeepseg/assets/8950813/705c0a12-4306-45f2-b642-f655d12e4dfb)

Great! Thanks so much! Just to make sure I'm understanding -- to get from pred --> after above, do you simply just subtract pred from img?

I got everything to run on GPU and it looks like it works pretty well! I've been subtracting images using imagemagick, but I think maybe it's ending up in the...

Sorry to have dropped the ball on this! I figured out the subtraction thing -- it was because I was only editing the axonmyelin file and messed up with the...