isONcorrect
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ksahlin
Error correction of ONT transcript reads
Hi, I would like to know why isONcorrect/modules/__init__.py is blank? What should I write on it? THX
Hi .. I have Nanopore cdna reads and tried variant calling for this data. One set was analysis with reads without error correction where i see a lot of variants...
Hello, I encountered an error when running isoncorrect. I created the virtual environment named isoncorrect through conda, and successfully installed isonclust and isoncorrect. Through --help, it also showed that the...
Hello! I have an issue with the isONcorrect installation and would appreciate your advice. Last November, I installed isONcorrect using conda (and created the isoncorrect env) by following your README...
Hello thanks for this amazing work, I used it on Nanopore data, especially my goal was cleaning the data inorder to find Mutations which already confirmed by WES. it seems...
Hi @ksahlin , The Racon cuda interface does have a different interface but I think it should be easily adoptable and cuda correction could accelerate and improve the resulting correction....
Dear Author, Your tool 'isONcorrect' can be very useful to many users. I wonder if you can provide a dockerfile, or better yet, create a docker image with all dependencies...
Hi I am trying to correct some cDNA reads from a PrormethION run, the data is very big (120M reads!). The isONcorrect pipeline was running and generated the full_length.fq but...
Hi guys, I'm trying to run with parallel processors, but I realized that it is not working. It is running with only one processor, that is why it is taking...
