Konrad Rokicki

That switch statement just determines that this is a local repo, which is correct. The issue is that localfs.go doesn't do that kind of validation, it just takes the repo's...

Yes, it would be less than ideal. I don't have any other workaround ideas, besides actually implementing SSH support. Thanks for considering.

We are also running into this issue. A workaround we use is to parse the STDOUT stream and detect keywords like "Exception" and "Macro Error", but it's a lot of...

I just wanted to add a vote for this feature and add some more rationale. Nextflow is a great workflow language, but it's hard to justify its claim of scalability...

Thanks for debunking that. I double checked my own tests and it seems that I was running up against executor.queueSize, which has a default of 100. Increasing this helped a...

Makes sense. I just wanted to shed some more light on the use case, in case there is some redesign or extension in the future that could address it. Thanks...

Good question. Let's wait for input from Yuhan and others.

Hi @pranathivemuri, thanks for the suggestion, we'll definitely take it into account for a future version.

@pranathivemuri, it would only require a change to the stitching module, specifically the code here: https://github.com/saalfeldlab/stitching-spark and here: https://github.com/JaneliaSciComp/multifish/blob/master/workflows/stitching.nf Once the data is ingested and stitched, the rest of the...

I should add that I tried nvm's advice to run `unset NVM_NPM_CONFIG_PREFIX_ENV` and it didn't help. I also tried changing the .env file to clear it from the environment that...