Kozo Nishida
Kozo Nishida
The following information may be required when we apply for sponsoring or grant. - Scholarly paper(s) (including preprints) citing or mentioning the software project - Monthly downloads from websites, monthly...
Display the following information after "pip install ecell" - The license document installation PATH of the E-Cell and the bundled binary libs (HDF5 and gsl)
## env - Windows10 - ecell 4.2.0 - miniconda Python 3.7.1 ## Errors ``` (base) C:\Users\a\ecell4\python\tests>python -m unittest EEE.......E.EE. ====================================================================== ERROR: test1 (core.test_context.ContextText) ---------------------------------------------------------------------- Traceback (most recent call last): File...
When I tried to install bridgedb with groovysh `:grab`, I got the following error. ``` groovy:000> :grab 'org.bridgedb:org.bridgedb.bio:3.0.1' ERROR java.lang.RuntimeException: Error grabbing Grapes -- [unresolved dependency: commonj.sdo#commonj.sdo;2.1.1.v201112051852: not found] at...
This is due to forgetting to update setup.py We need to increase the version of `ecell4_base` in the ecell4 `setup.py` from 2.0.5 to 2.1.0.
I will add some tests using https://github.com/sbmlteam/sbml-test-suite to ecell4.
Although I can not give a concrete example yet, but it seems possible to use this Netflix integration testing method for E-Cell4. https://medium.com/netflix-techblog/scheduling-notebooks-348e6c14cfd6
- [ ] input csv or tsv format - [ ] output format
### input ecell4.core.NetworkModel ### output LaTeX representing the following image 