kochaneks

I am running into the CK test issue as described above with a BHMM. I'm not quite sure how to interpret this discussion in terms of my model. Does this...

@marscher thanks for your reply. I've attached the dtrajs below. I have chosen to states and a lag time of 150 steps. To confirm that I'm understanding the issue correctly,...

Included below! [dtrajs.tar.gz](https://github.com/markovmodel/PyEMMA/files/3298230/dtrajs.tar.gz)

It's with a BHMM, not BMSM. I can provide the exact code if necessary.

Thanks for your help with this! I've been able to use the maximum likelihood HMM to perform the CK-test, but unfortunately I'm a bit puzzled by the results. I explain...

Thanks for your explanation. Out of curiosity, do you have any indication of when you expect a fix for the BHMM CK-test?