Sergey Klevtsov

Incorrect concatenation of link flags in SetupMPI.cmake

1

CMake: 3.14.3 BLT: https://github.com/LLNL/blt/commit/938345715810c6457d3e57a2c20d4ee0fa253632 Link flags for C, C++ and Fortran obtained from their respective compiler wrappers are concatenated with a `;` using `list(APPEND ...)`: https://github.com/LLNL/blt/blob/938345715810c6457d3e57a2c20d4ee0fa253632/cmake/thirdparty/SetupMPI.cmake#L84 However `MPI_C_LINK_FLAGS`, `MPI_CXX_LINK_FLAGS` and...

Link options from MPI compiler wrapper collapsed incorrectly (CMake 3.13+)

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CMake: 3.14.3 BLT: https://github.com/LLNL/blt/commit/938345715810c6457d3e57a2c20d4ee0fa253632 When using e.g. Intel MPI, link flags obtained from `mpicc` may look like the following: ``` -Xlinker -rpath -Xlinker /path/to/A -Xlinker -rpath -Xlinker /path/to/B -Xlinker -rpath...

[Bug] SymbolicFunction expression containing commas inputs fail XML validation

1

**Describe the bug** A really minor inconvenience, but a `SymbolicFunction` expression with commas (which are necessary for using some binary functions, e.g. `pow(x,y)`) fails validation, because our validation regex pattern...

We should be enforcing warning-less sphinx build. Practice shows rST files tend to fall behind with code changes. Steps: - [ ] fix remaining errors and warnings in `sphinx_docs` target...

[Feature] Ideas for better logging

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This is a proposal to improve the clarity of logging and overall user experience in GEOSX. I will describe several ideas that can be discussed/accepted/rejected separately. 1. **Component log levels**....

[Bug] Non-MPI build broken

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**Describe the bug** Non-MPI build is broken and not tested in CI. **To Reproduce** Steps to reproduce the behavior: 1. Configure with `-DENABLE_MPI=OFF` 2. Build `geosx` 3. See errors ```...

Allocating fields on sets

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**Is your feature request related to a problem? Please describe.** Add the capability to allocate data fields on mesh sets (e.g. element, face, vertex sets). This is needed for efficient...

[Feature] Geometric object margins

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**What is the requested feature?** Automatically extend geometric object bounds by an epsilon. **Is your request related to a specific problem?** _I'm always frustrated when_ I have to manually specify...

[Feature] Make preprocessed input files relocatable

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**What is the requested feature?** Would be nice if preprocessed files could be moved around on the filesystem without breaking. **Is your request related to a specific problem?** When using...

Nonlinear residuals should not be mesh-dependent

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**Problem** In single-phase flow solvers (FVM, HybridFVM, and by extension, single-phase poromechanics), the nonlinear residual is dependent on mesh resolution. E.g. for a particular problem (fixed-size cube with left-to-right pressure...