BIGSdb
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kjolley
Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
We could probably remove all GRANT statements from the database setup SQL files and then just create the databases using the user that we will use to connect with. This...
Sometimes we need to differentiate assemblies that are scaffolded from those which are not. The script could update a field in the isolate table.
This may become necessary for GDPR compliance issues.
Results could optionally populate GenomeComparator settings with only non-paralogous loci.
The sequences should also be excluded from the alignment. Default option with ability to override.
Currently this can only be modified directly within the database.
Now that users can create their own projects, we should clean up any created that do not have any member isolates.