Bruno P. Kinoshita
Bruno P. Kinoshita
Hi @kannon92 ! :wave: How do you see the ontology being used with a directory? Would it be something like `myonto:ImagesListDirectory` be applied to a `Directory` to validate that the...
Sorry the delay. Tested with the example 15 from the user guide. Confirmed the directory is not deleted. Everything looking good! :+1: Thanks  ```cwltool --leave-tmpdir linkfile.cwl arguments-job.yml```
Here's a workaround that works for the example workflow above, with the downside that it is annoying to have to duplicate inputs. ```cwl #!/usr/bin/env cwl-runner cwlVersion: v1.0 class: Workflow hints:...
Same output with the latest version of `cwltool` and using `v1.0` or `v1.2`. I think the `type` element is a [`CommandInputRecordSchema`](https://www.commonwl.org/v1.2/CommandLineTool.html#CommandInputRecordSchema), and its `inputBinding` is telling `cwltool` to add the...
Currently failing: `test_udocker_should_display_memory_usage` & ``` 2022-08-06T04:27:08.2095534Z Test [182/197] dynamic_resreq_wf_optional_file_default: Within a workflow, test accessing the size attribute of an optional input File as part of a CommandLineTool's ResourceRequirement calculation. The...
Conformance tests fixed locally, mypy and linter passing too. Pushed a new commit, waiting for CI. I think mypy failed on GH, but I'm hoping it's just a glitch (otherwise...
From today's APAC-EMEA meeting: 1. Does it work with command-line tool, expression tool? Operation is OK too? 2. Need to add to conformance tests. 3. Need to update specification (perhaps)....
>Does it work with command-line tool, expression tool? Operation is OK too? It does! :tada: I thought I would have to modify `default_make_tool` in other modules (for commandline tool and...
> Great to see CI passing! :tada: > Please add local copies of the suggested conformance tests that did not previously pass, and use pytest to confirm that they now...
@mr-c I tried `make cleanup` and it fixed a lot of files locally. CI appears to be complaining about changes to be made in files that are not in the...