Bálint Kincses comments

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                                            Bálint Kincses

BIDS validator Error 1: [Code 0] INTERNAL ERROR - SOME VALIDATION STEPS MAY NOT HAVE OCCURRED

Here is a part of it: ``` ├── dataset_description.json ├── sub-1015 │ ├── anat │ │ └── sub-1015_T1w.nii.gz │ └── func │ ├── sub-1015_task-rest_bold.json │ └── sub-1015_task-rest_bold.nii.gz ├── sub-1022 │ ...

BIDS validator Error 1: [Code 0] INTERNAL ERROR - SOME VALIDATION STEPS MAY NOT HAVE OCCURRED

So I think I find the problem. In my data_description.json I specified the SourceDatasets key and the value was not appropriately specified. (the path contained ' \ ' instead of...

BIDS validator Error 1: [Code 0] INTERNAL ERROR - SOME VALIDATION STEPS MAY NOT HAVE OCCURRED

yeah, after correcting the JSON it worked. a more specific error message might be a good idea. Thank you for your time!

BIDS validator Error 1: [Code 0] INTERNAL ERROR - SOME VALIDATION STEPS MAY NOT HAVE OCCURRED

The problematic part is in bold. { "Name": "Fear of pain and tone", "BIDSVersion": "1.5.0", "DatasetType": "raw", "Authors": [ "Balint Kincses", "Robert Pawlik" ], "SourceDatasets": [ {**"URL": "C:...\study-Koenen2021\mri\sourcedata"**} ], "ReferencesAndLinks":...

segmentation fault in mri_convert

I face a similar issue. I could run a few weeks back recon-all (freesurfer6.0) from Singularity on our server. Trying the same container with the same subject, it exits with...

segmentation fault in mri_convert

It seems that we have had some update on our server and there was some issue with mounting the tmp folder in the container. It seems that freesurfer could not...